RNA-Seq Analysis Reveals Candidate Targets for Curcumin against Tetranychus cinnabarinus

المؤلفون المشاركون

Liu, Xuejiao
Wu, Dousheng
Zhang, Yongqiang
Zhou, Hong
Lai, Ting
Ding, Wei

المصدر

BioMed Research International

العدد

المجلد 2016، العدد 2016 (31 ديسمبر/كانون الأول 2016)، ص ص. 1-10، 10ص.

الناشر

Hindawi Publishing Corporation

تاريخ النشر

2016-09-08

دولة النشر

مصر

عدد الصفحات

10

التخصصات الرئيسية

الطب البشري

الملخص EN

Tetranychus cinnabarinus is an important agricultural pest with a broad host range.

We previously identified curcumin as a promising acaricidal compound against T.

cinnabarinus.

However, the acaricidal mechanism of curcumin remains unknown.

In this study, RNA-seq was employed to analyze the transcriptome changes in T.

cinnabarinus treated with curcumin or the solvent.

A total of 105,706,297 clean sequence reads were generated by sequencing, with more than 90% of the reads successfully mapped to the reference sequence.

The RNA-seq identified 111 and 96 differentially expressed genes between curcumin- and solvent-treated mites at 24 and 48 h after treatment, respectively.

GO enrichment analysis of differentially expressed genes showed that the cellular process was the dominant group at both time points.

Finally, we screened 23 differentially expressed genes that were functionally identical or similar to the targets of common insecticide/acaricides or genes that were associated with mite detoxification and metabolism.

Calmodulin, phospholipase A2, and phospholipase C were activated upon curcumin treatment suggesting that the calcium channel related genes might play important roles in mite’s response to curcumin.

Overall our results revealed the global transcriptional changes in T.

cinnabarinus after curcumin treatment to enable further identification of the targets of curcumin in mites.

نمط استشهاد جمعية علماء النفس الأمريكية (APA)

Liu, Xuejiao& Wu, Dousheng& Zhang, Yongqiang& Zhou, Hong& Lai, Ting& Ding, Wei. 2016. RNA-Seq Analysis Reveals Candidate Targets for Curcumin against Tetranychus cinnabarinus. BioMed Research International،Vol. 2016, no. 2016, pp.1-10.
https://search.emarefa.net/detail/BIM-1097158

نمط استشهاد الجمعية الأمريكية للغات الحديثة (MLA)

Liu, Xuejiao…[et al.]. RNA-Seq Analysis Reveals Candidate Targets for Curcumin against Tetranychus cinnabarinus. BioMed Research International No. 2016 (2016), pp.1-10.
https://search.emarefa.net/detail/BIM-1097158

نمط استشهاد الجمعية الطبية الأمريكية (AMA)

Liu, Xuejiao& Wu, Dousheng& Zhang, Yongqiang& Zhou, Hong& Lai, Ting& Ding, Wei. RNA-Seq Analysis Reveals Candidate Targets for Curcumin against Tetranychus cinnabarinus. BioMed Research International. 2016. Vol. 2016, no. 2016, pp.1-10.
https://search.emarefa.net/detail/BIM-1097158

نوع البيانات

مقالات

لغة النص

الإنجليزية

الملاحظات

Includes bibliographical references

رقم السجل

BIM-1097158