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The Shared and Specific Genes and a Comparative Genomics Analysis within Three Hanseniaspora Strains
المؤلفون المشاركون
Chen, Kai
Tian, Zhonghuan
Jiang, Fatang
Cheng, Yunjiang
Long, Chao-an
المصدر
International Journal of Genomics
العدد
المجلد 2019، العدد 2019 (31 ديسمبر/كانون الأول 2019)، ص ص. 1-6، 6ص.
الناشر
Hindawi Publishing Corporation
تاريخ النشر
2019-06-02
دولة النشر
مصر
عدد الصفحات
6
التخصصات الرئيسية
الملخص EN
Kloeckera apiculata plays an important role in the inhibition of citrus postharvest blue and green mould diseases.
This study was based on the previous genome sequencing of K.
apiculata strain 34-9.
After homologous comparison, scaffold 27 was defined as the mitochondrial (mt) sequence of K.
apiculata 34-9.
The comparison showed a high level of sequence identity between scaffold 27 and the known mtDNA of Hanseniaspora uvarum.
The genome sequence of H.
vineae T02/19AF showed several short and discontinuous fragments homologous to the mtDNA of H.
uvarum.
The shared and specific genes of K.
apiculata, H.
uvarum, and H.
vineae were analysed by family using the TreeFam methodology.
GO analysis was used to classify the shared and specific genes.
Most of the gene families were classified into the functional categories of cellular component and metabolic processes.
The whole-genome phylogram and genome synteny analysis showed that K.
apiculata was more closely related to H.
uvarum than to H.
vineae.
The genomic comparisons clearly displayed the locations of the homologous regions in each genome.
This analysis could contribute to discovering the genomic similarities and differences within the genus Hanseniaspora.
In addition, some regions were not collinearity-matched in the genome of K.
apiculata compared with that of H.
uvarum or H.
vineae, and these sequences might have resulted from evolutionary variations.
نمط استشهاد جمعية علماء النفس الأمريكية (APA)
Chen, Kai& Tian, Zhonghuan& Jiang, Fatang& Cheng, Yunjiang& Long, Chao-an. 2019. The Shared and Specific Genes and a Comparative Genomics Analysis within Three Hanseniaspora Strains. International Journal of Genomics،Vol. 2019, no. 2019, pp.1-6.
https://search.emarefa.net/detail/BIM-1165746
نمط استشهاد الجمعية الأمريكية للغات الحديثة (MLA)
Chen, Kai…[et al.]. The Shared and Specific Genes and a Comparative Genomics Analysis within Three Hanseniaspora Strains. International Journal of Genomics No. 2019 (2019), pp.1-6.
https://search.emarefa.net/detail/BIM-1165746
نمط استشهاد الجمعية الطبية الأمريكية (AMA)
Chen, Kai& Tian, Zhonghuan& Jiang, Fatang& Cheng, Yunjiang& Long, Chao-an. The Shared and Specific Genes and a Comparative Genomics Analysis within Three Hanseniaspora Strains. International Journal of Genomics. 2019. Vol. 2019, no. 2019, pp.1-6.
https://search.emarefa.net/detail/BIM-1165746
نوع البيانات
مقالات
لغة النص
الإنجليزية
الملاحظات
Includes bibliographical references
رقم السجل
BIM-1165746
قاعدة معامل التأثير والاستشهادات المرجعية العربي "ارسيف Arcif"
أضخم قاعدة بيانات عربية للاستشهادات المرجعية للمجلات العلمية المحكمة الصادرة في العالم العربي
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