Structural and Sequence Similarities of Hydra Xeroderma Pigmentosum A Protein to Human Homolog Suggest Early Evolution and Conservation
Joint Authors
Barve, Apurva
Ghaskadbi, Saroj
Ghaskadbi, Surendra
Source
Issue
Vol. 2013, Issue 2013 (31 Dec. 2013), pp.1-9, 9 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2013-09-05
Country of Publication
Egypt
No. of Pages
9
Main Subjects
Abstract EN
Xeroderma pigmentosum group A (XPA) is a protein that binds to damaged DNA, verifies presence of a lesion, and recruits other proteins of the nucleotide excision repair (NER) pathway to the site.
Though its homologs from yeast, Drosophila, humans, and so forth are well studied, XPA has not so far been reported from protozoa and lower animal phyla.
Hydra is a fresh-water cnidarian with a remarkable capacity for regeneration and apparent lack of organismal ageing.
Cnidarians are among the first metazoa with a defined body axis, tissue grade organisation, and nervous system.
We report here for the first time presence of XPA gene in hydra.
Putative protein sequence of hydra XPA contains nuclear localization signal and bears the zinc-finger motif.
It contains two conserved Pfam domains and various characterized features of XPA proteins like regions for binding to excision repair cross-complementing protein-1 (ERCC1) and replication protein A 70 kDa subunit (RPA70) proteins.
Hydra XPA shows a high degree of similarity with vertebrate homologs and clusters with deuterostomes in phylogenetic analysis.
Homology modelling corroborates the very close similarity between hydra and human XPA.
The protein thus most likely functions in hydra in the same manner as in other animals, indicating that it arose early in evolution and has been conserved across animal phyla.
American Psychological Association (APA)
Barve, Apurva& Ghaskadbi, Saroj& Ghaskadbi, Surendra. 2013. Structural and Sequence Similarities of Hydra Xeroderma Pigmentosum A Protein to Human Homolog Suggest Early Evolution and Conservation. BioMed Research International،Vol. 2013, no. 2013, pp.1-9.
https://search.emarefa.net/detail/BIM-1005281
Modern Language Association (MLA)
Barve, Apurva…[et al.]. Structural and Sequence Similarities of Hydra Xeroderma Pigmentosum A Protein to Human Homolog Suggest Early Evolution and Conservation. BioMed Research International No. 2013 (2013), pp.1-9.
https://search.emarefa.net/detail/BIM-1005281
American Medical Association (AMA)
Barve, Apurva& Ghaskadbi, Saroj& Ghaskadbi, Surendra. Structural and Sequence Similarities of Hydra Xeroderma Pigmentosum A Protein to Human Homolog Suggest Early Evolution and Conservation. BioMed Research International. 2013. Vol. 2013, no. 2013, pp.1-9.
https://search.emarefa.net/detail/BIM-1005281
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1005281