Pin-Align: A New Dynamic Programming Approach to Align Protein-Protein Interaction Networks
Joint Authors
Amir-Ghiasvand, Farid
Nowzari-Dalini, Abbas
Momenzadeh, Vida
Source
Computational and Mathematical Methods in Medicine
Issue
Vol. 2014, Issue 2014 (31 Dec. 2014), pp.1-13, 13 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2014-11-09
Country of Publication
Egypt
No. of Pages
13
Main Subjects
Abstract EN
To date, few tools for aligning protein-protein interaction networks have been suggested.
These tools typically find conserved interaction patterns using various local or global alignment algorithms.
However, the improvement of the speed, scalability, simplification, and accuracy of network alignment tools is still the target of new researches.
In this paper, we introduce Pin-Align, a new tool for local alignment of protein-protein interaction networks.
Pin-Align accuracy is tested on protein interaction networks from IntAct, DIP, and the Stanford Network Database and the results are compared with other well-known algorithms.
It is shown that Pin-Align has higher sensitivity and specificity in terms of KEGG Ortholog groups.
American Psychological Association (APA)
Amir-Ghiasvand, Farid& Nowzari-Dalini, Abbas& Momenzadeh, Vida. 2014. Pin-Align: A New Dynamic Programming Approach to Align Protein-Protein Interaction Networks. Computational and Mathematical Methods in Medicine،Vol. 2014, no. 2014, pp.1-13.
https://search.emarefa.net/detail/BIM-1016793
Modern Language Association (MLA)
Amir-Ghiasvand, Farid…[et al.]. Pin-Align: A New Dynamic Programming Approach to Align Protein-Protein Interaction Networks. Computational and Mathematical Methods in Medicine No. 2014 (2014), pp.1-13.
https://search.emarefa.net/detail/BIM-1016793
American Medical Association (AMA)
Amir-Ghiasvand, Farid& Nowzari-Dalini, Abbas& Momenzadeh, Vida. Pin-Align: A New Dynamic Programming Approach to Align Protein-Protein Interaction Networks. Computational and Mathematical Methods in Medicine. 2014. Vol. 2014, no. 2014, pp.1-13.
https://search.emarefa.net/detail/BIM-1016793
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1016793