Mathematical Characterization of Protein Transmembrane Regions
Joint Authors
Novič, Marjana
Roy Choudhury, Amrita
Zhukov, Nikolay
Source
Issue
Vol. 2013, Issue 2013 (31 Dec. 2013), pp.1-6, 6 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2013-04-15
Country of Publication
Egypt
No. of Pages
6
Main Subjects
Medicine
Information Technology and Computer Science
Abstract EN
Graphical bioinformatics has paved a unique way of mathematical characterization of proteins and proteomic maps.
The graphics representations and the corresponding mathematical descriptors have proved to be useful and have provided unique solutions to problems related to identification, comparisons, and analyses of protein sequences and proteomics maps.
Based on sequence information alone, these descriptors are independent from physiochemical properties of amino acids and evolutionary information.
In this work, we have presented invariants from amino acid adjacency matrix and decagonal isometries matrix as potential descriptors of protein sequences.
Encoding protein sequences into amino acid adjacency matrix is already well established.
We have shown its application in classification of transmembrane and nontransmembrane regions of membrane protein sequences.
We have introduced the dodecagonal isometries matrix, which is a novel method of encoding protein sequences based on decagonal isometries group.
American Psychological Association (APA)
Roy Choudhury, Amrita& Zhukov, Nikolay& Novič, Marjana. 2013. Mathematical Characterization of Protein Transmembrane Regions. The Scientific World Journal،Vol. 2013, no. 2013, pp.1-6.
https://search.emarefa.net/detail/BIM-1033107
Modern Language Association (MLA)
Roy Choudhury, Amrita…[et al.]. Mathematical Characterization of Protein Transmembrane Regions. The Scientific World Journal No. 2013 (2013), pp.1-6.
https://search.emarefa.net/detail/BIM-1033107
American Medical Association (AMA)
Roy Choudhury, Amrita& Zhukov, Nikolay& Novič, Marjana. Mathematical Characterization of Protein Transmembrane Regions. The Scientific World Journal. 2013. Vol. 2013, no. 2013, pp.1-6.
https://search.emarefa.net/detail/BIM-1033107
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1033107