Gene Expression Profiling of Grass Carp (Ctenopharyngodon idellus) and Crisp Grass Carp
Joint Authors
Yu, Ermeng
Xie, Jun
Wang, Guangjun
Yu, Deguang
Gong, Wangbao
Li, Zhifei
Wang, Haiying
Xia, Yun
Wei, Nan
Source
International Journal of Genomics
Issue
Vol. 2014, Issue 2014 (31 Dec. 2014), pp.1-15, 15 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2014-11-30
Country of Publication
Egypt
No. of Pages
15
Main Subjects
Abstract EN
Grass carp (Ctenopharyngodon idellus) is one of the most important freshwater fish that is native to China, and crisp grass carp is a kind of high value-added fishes which have higher muscle firmness.
To investigate biological functions and possible signal transduction pathways that address muscle firmness increase of crisp grass carp, microarray analysis of 14,900 transcripts was performed.
Compared with grass carp, 127 genes were upregulated and 114 genes were downregulated in crisp grass carp.
Gene ontology (GO) analysis revealed 30 GOs of differentially expressed genes in crisp grass carp.
And strong correlation with muscle firmness increase of crisp grass carp was found for these genes from differentiation of muscle fibers and deposition of ECM, and also glycolysis/gluconeogenesis pathway and calcium metabolism may contribute to muscle firmness increase.
In addition, a number of genes with unknown functions may be related to muscle firmness, and these genes are still further explored.
Overall, these results had been demonstrated to play important roles in clarifying the molecular mechanism of muscle firmness increase in crisp grass carp.
American Psychological Association (APA)
Yu, Ermeng& Xie, Jun& Wang, Guangjun& Yu, Deguang& Gong, Wangbao& Li, Zhifei…[et al.]. 2014. Gene Expression Profiling of Grass Carp (Ctenopharyngodon idellus) and Crisp Grass Carp. International Journal of Genomics،Vol. 2014, no. 2014, pp.1-15.
https://search.emarefa.net/detail/BIM-1036693
Modern Language Association (MLA)
Yu, Ermeng…[et al.]. Gene Expression Profiling of Grass Carp (Ctenopharyngodon idellus) and Crisp Grass Carp. International Journal of Genomics No. 2014 (2014), pp.1-15.
https://search.emarefa.net/detail/BIM-1036693
American Medical Association (AMA)
Yu, Ermeng& Xie, Jun& Wang, Guangjun& Yu, Deguang& Gong, Wangbao& Li, Zhifei…[et al.]. Gene Expression Profiling of Grass Carp (Ctenopharyngodon idellus) and Crisp Grass Carp. International Journal of Genomics. 2014. Vol. 2014, no. 2014, pp.1-15.
https://search.emarefa.net/detail/BIM-1036693
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1036693