A Coarse-Grained Molecular Dynamics Simulation Using NAMD Package to Reveal Aggregation Profile of Phospholipids Self-Assembly in Water
Joint Authors
Hudiyanti, Dwi
Radifar, Muhammad
Raharjo, Tri Joko
Narsito, Narsito
Noegrohati, Sri
Source
Issue
Vol. 2014, Issue 2014 (31 Dec. 2014), pp.1-6, 6 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2014-08-03
Country of Publication
Egypt
No. of Pages
6
Main Subjects
Abstract EN
The energy profile of self-assembly process of DLPE, DLPS, DOPE, DOPS, DLiPE, and DLiPS in water was investigated by a coarse-grained molecular dynamics simulation using NAMD package.
The self-assembly process was initiated from random configurations.
The simulation was carried out for 160 ns.
This study presented proof that there were three major self-assembled arrangements which became visible for a certain duration when the simulation took place, that is, liposome, deformed liposome, and planar bilayer.
The energy profile that shows plateau at the time of these structures emerge confirmed their stability therein.
Our findings have highlighted the idea that liposomes and deformed liposomes are metastable phases which eventually will turn into planar bilayer, the stable one.
American Psychological Association (APA)
Hudiyanti, Dwi& Radifar, Muhammad& Raharjo, Tri Joko& Narsito, Narsito& Noegrohati, Sri. 2014. A Coarse-Grained Molecular Dynamics Simulation Using NAMD Package to Reveal Aggregation Profile of Phospholipids Self-Assembly in Water. Journal of Chemistry،Vol. 2014, no. 2014, pp.1-6.
https://search.emarefa.net/detail/BIM-1039930
Modern Language Association (MLA)
Hudiyanti, Dwi…[et al.]. A Coarse-Grained Molecular Dynamics Simulation Using NAMD Package to Reveal Aggregation Profile of Phospholipids Self-Assembly in Water. Journal of Chemistry No. 2014 (2014), pp.1-6.
https://search.emarefa.net/detail/BIM-1039930
American Medical Association (AMA)
Hudiyanti, Dwi& Radifar, Muhammad& Raharjo, Tri Joko& Narsito, Narsito& Noegrohati, Sri. A Coarse-Grained Molecular Dynamics Simulation Using NAMD Package to Reveal Aggregation Profile of Phospholipids Self-Assembly in Water. Journal of Chemistry. 2014. Vol. 2014, no. 2014, pp.1-6.
https://search.emarefa.net/detail/BIM-1039930
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1039930