T4SP Database 2.0: An Improved Database for Type IV Secretion Systems in Bacterial Genomes with New Online Analysis Tools
Joint Authors
Han, Na
Yu, Weiwen
Qiang, Yujun
Zhang, Wen
Source
Computational and Mathematical Methods in Medicine
Issue
Vol. 2016, Issue 2016 (31 Dec. 2016), pp.1-4, 4 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2016-09-21
Country of Publication
Egypt
No. of Pages
4
Main Subjects
Abstract EN
Type IV secretion system (T4SS) can mediate the passage of macromolecules across cellular membranes and is essential for virulent and genetic material exchange among bacterial species.
The Type IV Secretion Project 2.0 (T4SP 2.0) database is an improved and extended version of the platform released in 2013 aimed at assisting with the detection of Type IV secretion systems (T4SS) in bacterial genomes.
This advanced version provides users with web server tools for detecting the existence and variations of T4SS genes online.
The new interface for the genome browser provides a user-friendly access to the most complete and accurate resource of T4SS gene information (e.g., gene number, name, type, position, sequence, related articles, and quick links to other webs).
Currently, this online database includes T4SS information of 5239 bacterial strains.
Conclusions.
T4SS is one of the most versatile secretion systems necessary for the virulence and survival of bacteria and the secretion of protein and/or DNA substrates from a donor to a recipient cell.
This database on virB/D genes of the T4SS system will help scientists worldwide to improve their knowledge on secretion systems and also identify potential pathogenic mechanisms of various microbial species.
American Psychological Association (APA)
Han, Na& Yu, Weiwen& Qiang, Yujun& Zhang, Wen. 2016. T4SP Database 2.0: An Improved Database for Type IV Secretion Systems in Bacterial Genomes with New Online Analysis Tools. Computational and Mathematical Methods in Medicine،Vol. 2016, no. 2016, pp.1-4.
https://search.emarefa.net/detail/BIM-1100230
Modern Language Association (MLA)
Han, Na…[et al.]. T4SP Database 2.0: An Improved Database for Type IV Secretion Systems in Bacterial Genomes with New Online Analysis Tools. Computational and Mathematical Methods in Medicine No. 2016 (2016), pp.1-4.
https://search.emarefa.net/detail/BIM-1100230
American Medical Association (AMA)
Han, Na& Yu, Weiwen& Qiang, Yujun& Zhang, Wen. T4SP Database 2.0: An Improved Database for Type IV Secretion Systems in Bacterial Genomes with New Online Analysis Tools. Computational and Mathematical Methods in Medicine. 2016. Vol. 2016, no. 2016, pp.1-4.
https://search.emarefa.net/detail/BIM-1100230
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1100230