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Using Genome-Wide SNP Discovery and Genotyping to Reveal the Main Source of Population Differentiation in Nothofagus dombeyi (Mirb.) Oerst. in Chile
Joint Authors
Hasbún, Rodrigo
González, Jorge
Iturra, Carolina
Fuentes, Glenda
Alarcón, Diego
Ruiz, Eduardo
Source
International Journal of Genomics
Issue
Vol. 2016, Issue 2016 (31 Dec. 2016), pp.1-10, 10 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2016-06-20
Country of Publication
Egypt
No. of Pages
10
Main Subjects
Abstract EN
Within a woody plant species, environmental heterogeneity has the potential to influence the distribution of genetic variation among populations through several evolutionary processes.
In some species, a relationship between environmental characteristics and the distribution of genotypes can be detected, showing the importance of natural selection as the main source of differentiation.
Nothofagus dombeyi (Mirb.) Oerst.
(Nothofagaceae) is an endemic tree species occurring both in Chile and in Argentina temperate forests.
Postglacial history has been studied with chloroplast DNA and evolutionary forces shaping genetic variation patterns have been analysed with isozymes but fine-scale genetic diversity studies are needed.
The study of demographic and selection histories in Nothofagus dombeyi requires more informative markers such as single nucleotide polymorphisms (SNP).
Genotyping-by-Sequencing tools now allow studying thousands of SNP markers at reasonable prices in nonmodel species.
We investigated more than 10 K SNP loci for signatures of local adaptation and showed that interrogation of genomic resources can identify shifts in genetic diversity and putative adaptive signals in this nonmodel woody species.
American Psychological Association (APA)
Hasbún, Rodrigo& González, Jorge& Iturra, Carolina& Fuentes, Glenda& Alarcón, Diego& Ruiz, Eduardo. 2016. Using Genome-Wide SNP Discovery and Genotyping to Reveal the Main Source of Population Differentiation in Nothofagus dombeyi (Mirb.) Oerst. in Chile. International Journal of Genomics،Vol. 2016, no. 2016, pp.1-10.
https://search.emarefa.net/detail/BIM-1106156
Modern Language Association (MLA)
Hasbún, Rodrigo…[et al.]. Using Genome-Wide SNP Discovery and Genotyping to Reveal the Main Source of Population Differentiation in Nothofagus dombeyi (Mirb.) Oerst. in Chile. International Journal of Genomics No. 2016 (2016), pp.1-10.
https://search.emarefa.net/detail/BIM-1106156
American Medical Association (AMA)
Hasbún, Rodrigo& González, Jorge& Iturra, Carolina& Fuentes, Glenda& Alarcón, Diego& Ruiz, Eduardo. Using Genome-Wide SNP Discovery and Genotyping to Reveal the Main Source of Population Differentiation in Nothofagus dombeyi (Mirb.) Oerst. in Chile. International Journal of Genomics. 2016. Vol. 2016, no. 2016, pp.1-10.
https://search.emarefa.net/detail/BIM-1106156
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1106156