Genome Survey and Transcriptome Analysis on Mycelia and Primordia of Agaricus blazei

Joint Authors

Lu, Yuan-Ping
Liao, Jian-Hua
Guo, Zhong-Jie
Cai, Zhi-Xin
Chen, Mei-Yuan

Source

BioMed Research International

Issue

Vol. 2020, Issue 2020 (31 Dec. 2020), pp.1-12, 12 p.

Publisher

Hindawi Publishing Corporation

Publication Date

2020-01-14

Country of Publication

Egypt

No. of Pages

12

Main Subjects

Medicine

Abstract EN

Agaricus blazei, a type of edible straw-rotting mushroom with somewhat sweet taste and fragrance of almonds, has attracted considerable scientific and practical attention.

High-throughput Illumina PE150 and PacBio RSII platform were employed to generate a genomic sequence.

De novo assembly generated 36 contigs with 38,686,133 bp in size, containing 10,119 putative predicted genes.

Additionally, we also studied transcriptional regulation of the mycelia and the primordia for exploration of genes involved in fruiting body formation.

Expression profiling analysis revealed that 2,164 genes were upregulated in mycelia and 1,557 in primordia.

Functional enrichment showed that differentially expressed genes associated with response to stress, ribosome biogenesis, arginine biosynthesis, and steroid biosynthesis pathway were more active in fruiting body.

The genome and transcriptome analysis of A.

blazei provide valuable sequence resources and contribute to our understanding of genes related to the biosynthesis pathway of polysaccharide and benzaldehyde, as well as the fruiting body formation.

American Psychological Association (APA)

Lu, Yuan-Ping& Liao, Jian-Hua& Guo, Zhong-Jie& Cai, Zhi-Xin& Chen, Mei-Yuan. 2020. Genome Survey and Transcriptome Analysis on Mycelia and Primordia of Agaricus blazei. BioMed Research International،Vol. 2020, no. 2020, pp.1-12.
https://search.emarefa.net/detail/BIM-1131976

Modern Language Association (MLA)

Lu, Yuan-Ping…[et al.]. Genome Survey and Transcriptome Analysis on Mycelia and Primordia of Agaricus blazei. BioMed Research International No. 2020 (2020), pp.1-12.
https://search.emarefa.net/detail/BIM-1131976

American Medical Association (AMA)

Lu, Yuan-Ping& Liao, Jian-Hua& Guo, Zhong-Jie& Cai, Zhi-Xin& Chen, Mei-Yuan. Genome Survey and Transcriptome Analysis on Mycelia and Primordia of Agaricus blazei. BioMed Research International. 2020. Vol. 2020, no. 2020, pp.1-12.
https://search.emarefa.net/detail/BIM-1131976

Data Type

Journal Articles

Language

English

Notes

Includes bibliographical references

Record ID

BIM-1131976