Screening and Identification of Key Biomarkers for Bladder Cancer: A Study Based on TCGA and GEO Data

Joint Authors

Xia, Qinghua
Xu, Yingkun
Ma, Liye
Li, Jianyi
Wu, Guangzhen
Li, Jiatong
Ruan, Ningke
Chen, Yougen
Han, Xiaoyang
Wei, Yanjun
Li, Liang
Zhang, Hongge

Source

BioMed Research International

Issue

Vol. 2020, Issue 2020 (31 Dec. 2020), pp.1-20, 20 p.

Publisher

Hindawi Publishing Corporation

Publication Date

2020-01-25

Country of Publication

Egypt

No. of Pages

20

Main Subjects

Medicine

Abstract EN

Bladder cancer (BLCA) is a common malignant cancer, and it is the most common genitourinary cancer in the world.

The recurrence rate is the highest of all cancers, and the treatment of BLCA has only slightly improved over the past 30 years.

Genetic and environmental factors play an important role in the development and progression of BLCA.

However, the mechanism of cancer development remains to be proven.

Therefore, the identification of potential oncogenes is urgent for developing new therapeutic directions and designing novel biomarkers for the diagnosis and prognosis of BLCA.

Based on this need, we screened overlapping differentially expressed genes (DEG) from the GSE7476, GSE13507, and TCGA BLCA datasets.

To identify the central genes from these DEGs, we performed a protein-protein interaction network analysis.

To investigate the role of DEGs and the underlying mechanisms in BLCA, we performed Gene Ontology (GO) and Kyoto Gene and Genomic Encyclopedia (KEGG) analysis; we identified the hub genes via different evaluation methods in cytoHubba and then selected the target genes by performing survival analysis.

Finally, the relationship between these target genes and tumour immunity was analysed to explore the roles of these genes.

In summary, our current studies indicate that both cell division cycle 20 (CDC20) and abnormal spindle microtubule assembly (ASPM) genes are potential prognostic biomarkers for BLCA.

It may also be a potential immunotherapeutic target with future clinical significance.

American Psychological Association (APA)

Xu, Yingkun& Wu, Guangzhen& Li, Jianyi& Li, Jiatong& Ruan, Ningke& Ma, Liye…[et al.]. 2020. Screening and Identification of Key Biomarkers for Bladder Cancer: A Study Based on TCGA and GEO Data. BioMed Research International،Vol. 2020, no. 2020, pp.1-20.
https://search.emarefa.net/detail/BIM-1137391

Modern Language Association (MLA)

Xu, Yingkun…[et al.]. Screening and Identification of Key Biomarkers for Bladder Cancer: A Study Based on TCGA and GEO Data. BioMed Research International No. 2020 (2020), pp.1-20.
https://search.emarefa.net/detail/BIM-1137391

American Medical Association (AMA)

Xu, Yingkun& Wu, Guangzhen& Li, Jianyi& Li, Jiatong& Ruan, Ningke& Ma, Liye…[et al.]. Screening and Identification of Key Biomarkers for Bladder Cancer: A Study Based on TCGA and GEO Data. BioMed Research International. 2020. Vol. 2020, no. 2020, pp.1-20.
https://search.emarefa.net/detail/BIM-1137391

Data Type

Journal Articles

Language

English

Notes

Includes bibliographical references

Record ID

BIM-1137391