Association of VPREB1 Gene Copy Number Variation and Rheumatoid Arthritis Susceptibility
Joint Authors
Bhatti, Attya
Feingold, Eleanor
John, Peter
Aslam, Muhammad Muaaz
Fan, Kang-Hsien
Kamboh, M. Ilyas
Demirci, F. Yesim
Source
Issue
Vol. 2020, Issue 2020 (31 Dec. 2020), pp.1-5, 5 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2020-10-08
Country of Publication
Egypt
No. of Pages
5
Main Subjects
Abstract EN
Objective.
Copy number variation (CNV) is a structural variation in the human genome that has been associated with multiple clinical phenotypes.
B cells are important components of rheumatoid arthritis- (RA-) mediated immune response; hence, CNV in the regulators of B cells (such as VPREB1) can influence RA susceptibility.
In this study, we aimed to explore the association of CNV in the VPREB1 gene with RA susceptibility in the Pakistani population.
Methods.
A total of 1,106 subjects (616 RA cases, 490 healthy controls) were selected from three rheumatology centers in Pakistan.
VPREB1 CNV was determined using the TaqMan® CN assay (Hs02879734_cn, Applied Biosystems, Foster City, CA, USA), and CNV was estimated by using CopyCaller® (version 2.1; Applied Biosystems, USA) software.
Odds ratio (OR) was calculated by logistic regression with sex and age as covariates in R.
Results.
A significant association between >2 VPREB1 CNV and RA risk was observed with an OR of 3.92 (95% CI: 1.27 - 12.12; p=0.01746) in the total sample.
Whereas <2 CNV showed a significantly protective effect against RA risk in women with an OR of 0.48 (95% CI: 0.29-0.79; p=0.00381).
Conclusion.
CNV>2 of VPREB1 is a risk factor for RA in the total Pakistani population, while CNV<2 is protective in women.
American Psychological Association (APA)
Aslam, Muhammad Muaaz& John, Peter& Fan, Kang-Hsien& Bhatti, Attya& Feingold, Eleanor& Demirci, F. Yesim…[et al.]. 2020. Association of VPREB1 Gene Copy Number Variation and Rheumatoid Arthritis Susceptibility. Disease Markers،Vol. 2020, no. 2020, pp.1-5.
https://search.emarefa.net/detail/BIM-1153984
Modern Language Association (MLA)
Aslam, Muhammad Muaaz…[et al.]. Association of VPREB1 Gene Copy Number Variation and Rheumatoid Arthritis Susceptibility. Disease Markers No. 2020 (2020), pp.1-5.
https://search.emarefa.net/detail/BIM-1153984
American Medical Association (AMA)
Aslam, Muhammad Muaaz& John, Peter& Fan, Kang-Hsien& Bhatti, Attya& Feingold, Eleanor& Demirci, F. Yesim…[et al.]. Association of VPREB1 Gene Copy Number Variation and Rheumatoid Arthritis Susceptibility. Disease Markers. 2020. Vol. 2020, no. 2020, pp.1-5.
https://search.emarefa.net/detail/BIM-1153984
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1153984