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Comparative Transcriptome Analysis Reveals Molecular Defensive Mechanism of Arachis hypogaea in Response to Salt Stress
Joint Authors
Zhang, Hao
Zhao, Xiaobo
Sun, Quanxi
Yan, Caixia
Wang, Juan
Yuan, Cuiling
Li, Chunjuan
Shan, Shihua
Liu, Fengzhen
Source
International Journal of Genomics
Issue
Vol. 2020, Issue 2020 (31 Dec. 2020), pp.1-13, 13 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2020-02-27
Country of Publication
Egypt
No. of Pages
13
Main Subjects
Abstract EN
Abiotic stresses comprise all nonliving factors, such as soil salinity, drought, extreme temperatures, and metal toxicity, posing a serious threat to agriculture and affecting the plant production around the world.
Peanut (Arachis hypogaea L.) is one of the most important crops for vegetable oil, proteins, minerals, and vitamins in the world.
Therefore, it is of importance to understand the molecular mechanism of peanut against salt stress.
Six transcriptome sequencing libraries including 24-hour salt treatments and control samples were constructed from the young leaves of peanut.
A comprehensive analysis between two groups detected 3,425 differentially expressed genes (DEGs) including 2,013 upregulated genes and 1,412 downregulated genes.
Of these DEGs, 141 transcription factors (TFs) mainly consisting of MYB, AP2/ERF, WRKY, bHLH, and HSF were identified in response to salinity stress.
Further, GO categories of the DEGs highly related to regulation of cell growth, cell periphery, sustained external encapsulating structure, cell wall organization or biogenesis, antioxidant activity, and peroxidase activity were significantly enriched for upregulated DEGs.
The function of downregulated DEGs was mainly enriched in regulation of metabolic processes, oxidoreductase activity, and catalytic activity.
Fourteen DEGs with response to salt tolerance were validated by real-time PCR.
Taken together, the identification of DEGs’ response to salt tolerance of cultivated peanut will provide a solid foundation for improving salt-tolerant peanut genetic manipulation in the future.
American Psychological Association (APA)
Zhao, Xiaobo& Sun, Quanxi& Yan, Caixia& Wang, Juan& Yuan, Cuiling& Li, Chunjuan…[et al.]. 2020. Comparative Transcriptome Analysis Reveals Molecular Defensive Mechanism of Arachis hypogaea in Response to Salt Stress. International Journal of Genomics،Vol. 2020, no. 2020, pp.1-13.
https://search.emarefa.net/detail/BIM-1171285
Modern Language Association (MLA)
Zhao, Xiaobo…[et al.]. Comparative Transcriptome Analysis Reveals Molecular Defensive Mechanism of Arachis hypogaea in Response to Salt Stress. International Journal of Genomics No. 2020 (2020), pp.1-13.
https://search.emarefa.net/detail/BIM-1171285
American Medical Association (AMA)
Zhao, Xiaobo& Sun, Quanxi& Yan, Caixia& Wang, Juan& Yuan, Cuiling& Li, Chunjuan…[et al.]. Comparative Transcriptome Analysis Reveals Molecular Defensive Mechanism of Arachis hypogaea in Response to Salt Stress. International Journal of Genomics. 2020. Vol. 2020, no. 2020, pp.1-13.
https://search.emarefa.net/detail/BIM-1171285
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-1171285