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BRASERO : A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms
Joint Authors
Ouangraoua, Aida
Thermes, Claude
Ferraro, Pascal
d’Aubenton-Carafa, Yves
Sagot, Marie-France
de Monte, Antoine
Drevet, Christine
Herrbach, Claire
Leclerc, Fabrice
Saule, Cédric
Chauve, Cédric
Denise, Alain
Allali, Julien
Gautheret, Daniel
Touzet, Hélène
Termier, Michel
Source
Issue
Vol. 2012, Issue 2012 (31 Dec. 2012), pp.1-5, 5 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2012-05-23
Country of Publication
Egypt
No. of Pages
5
Main Subjects
Natural & Life Sciences (Multidisciplinary)
Biology
Abstract EN
The pairwise comparison of RNA secondary structures is a fundamental problem, with direct application in mining databases for annotating putative noncoding RNA candidates in newly sequenced genomes.
An increasing number of software tools are available for comparing RNA secondary structures, based on different models (such as ordered trees or forests, arc annotated sequences, and multilevel trees) and computational principles (edit distance, alignment).
We describe here the website BRASERO that offers tools for evaluating such software tools on real and synthetic datasets.
American Psychological Association (APA)
Allali, Julien& Saule, Cédric& Chauve, Cédric& d’Aubenton-Carafa, Yves& Denise, Alain& Drevet, Christine…[et al.]. 2012. BRASERO : A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. Advances in Bioinformatics،Vol. 2012, no. 2012, pp.1-5.
https://search.emarefa.net/detail/BIM-505978
Modern Language Association (MLA)
Allali, Julien…[et al.]. BRASERO : A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. Advances in Bioinformatics No. 2012 (2012), pp.1-5.
https://search.emarefa.net/detail/BIM-505978
American Medical Association (AMA)
Allali, Julien& Saule, Cédric& Chauve, Cédric& d’Aubenton-Carafa, Yves& Denise, Alain& Drevet, Christine…[et al.]. BRASERO : A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. Advances in Bioinformatics. 2012. Vol. 2012, no. 2012, pp.1-5.
https://search.emarefa.net/detail/BIM-505978
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-505978