Bioinformatic Tools for Inferring Functional Information from Plant Microarray Data II : Analysis Beyond Single Gene
Joint Authors
Source
International Journal of Plant Genomics
Issue
Vol. 2008, Issue 2008 (31 Dec. 2008), pp.1-13, 13 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2008-07-03
Country of Publication
Egypt
No. of Pages
13
Main Subjects
Abstract EN
While it is possible to interpret microarray experiments a single gene at a time, most studies generate long lists of differentially expressed genes whose interpretation requires the integration of prior biological knowledge.
This prior knowledge is stored in various public and private databases and covers several aspects of gene function and biological information.
In this review, we will describe the tools and places where to find prior accurate biological information and how to process and incorporate them to interpret microarray data analyses.
Here, we highlight selected tools and resources for gene class level ontology analysis (Section 2), gene coexpression analysis (Section 3), gene network analysis (Section 4), biological pathway analysis (Section 5), analysis of transcriptional regulation (Section 6), and omics data integration (Section 7).
The overall goal of this review is to provide researchers with tools and information to facilitate the interpretation of microarray data.
American Psychological Association (APA)
Coulibaly, Issa& Page, Grier P.. 2008. Bioinformatic Tools for Inferring Functional Information from Plant Microarray Data II : Analysis Beyond Single Gene. International Journal of Plant Genomics،Vol. 2008, no. 2008, pp.1-13.
https://search.emarefa.net/detail/BIM-506064
Modern Language Association (MLA)
Coulibaly, Issa& Page, Grier P.. Bioinformatic Tools for Inferring Functional Information from Plant Microarray Data II : Analysis Beyond Single Gene. International Journal of Plant Genomics No. 2008 (2008), pp.1-13.
https://search.emarefa.net/detail/BIM-506064
American Medical Association (AMA)
Coulibaly, Issa& Page, Grier P.. Bioinformatic Tools for Inferring Functional Information from Plant Microarray Data II : Analysis Beyond Single Gene. International Journal of Plant Genomics. 2008. Vol. 2008, no. 2008, pp.1-13.
https://search.emarefa.net/detail/BIM-506064
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references
Record ID
BIM-506064