Analysis of similarity dissimilarity of DNA sequences based on chaos game representation
Joint Authors
Source
Issue
Vol. 2013, Issue 2013 (31 Dec. 2013), pp.1-6, 6 p.
Publisher
Hindawi Publishing Corporation
Publication Date
2013-03-26
Country of Publication
Egypt
No. of Pages
6
Main Subjects
Abstract EN
The Chaos Game is an algorithm that can allow one to produce pictures of fractal structures.
Considering that the four bases A, G, C, and T of DNA sequences can be divided into three classes according to their chemical structure, we propose different kinds of CGR-walk sequences.
Based on CGR coordinates of random sequences, we introduce some invariants for the DNA primary sequences.
As an application, we can make the examination of similarity/dissimilarity among the first exon of β-globin gene of different species.
The results indicate that our method is efficient and can get more biological information.
American Psychological Association (APA)
Deng, Wei& Luan, Yihui. 2013. Analysis of similarity dissimilarity of DNA sequences based on chaos game representation. Abstract and Applied Analysis،Vol. 2013, no. 2013, pp.1-6.
https://search.emarefa.net/detail/BIM-508700
Modern Language Association (MLA)
Deng, Wei& Luan, Yihui. Analysis of similarity dissimilarity of DNA sequences based on chaos game representation. Abstract and Applied Analysis No. 2013 (2013), pp.1-6.
https://search.emarefa.net/detail/BIM-508700
American Medical Association (AMA)
Deng, Wei& Luan, Yihui. Analysis of similarity dissimilarity of DNA sequences based on chaos game representation. Abstract and Applied Analysis. 2013. Vol. 2013, no. 2013, pp.1-6.
https://search.emarefa.net/detail/BIM-508700
Data Type
Journal Articles
Language
English
Notes
Includes bibliographical references : p. 5-6
Record ID
BIM-508700