Enriching Genomic Resources and Transcriptional Profile Analysis of Miscanthus sinensis under Drought Stress Based on RNA Sequencing
المؤلفون المشاركون
Nie, Gang
Huang, Linkai
Ma, Xiao
Ji, Zhongjie
Zhang, Yajie
Tang, Lu
Zhang, Xinquan
المصدر
International Journal of Genomics
العدد
المجلد 2017، العدد 2017 (31 ديسمبر/كانون الأول 2017)، ص ص. 1-12، 12ص.
الناشر
Hindawi Publishing Corporation
تاريخ النشر
2017-11-29
دولة النشر
مصر
عدد الصفحات
12
التخصصات الرئيسية
الملخص EN
Miscanthus × giganteus is wildly cultivated as a potential biofuel feedstock around the world; however, the narrow genetic basis and sterile characteristics have become a limitation for its utilization.
As a progenitor of M. × giganteus, M.
sinensis is widely distributed around East Asia providing well abiotic stress tolerance.
To enrich the M.
sinensis genomic databases and resources, we sequenced and annotated the transcriptome of M.
sinensis by using an Illumina HiSeq 2000 platform.
Approximately 316 million high-quality trimmed reads were generated from 349 million raw reads, and a total of 114,747 unigenes were obtained after de novo assembly.
Furthermore, 95,897 (83.57%) unigenes were annotated to at least one database including NR, Swiss-Prot, KEGG, COG, GO, and NT, supporting that the sequences obtained were annotated properly.
Differentially expressed gene analysis indicates that drought stress 15 days could be a critical period for M.
sinensis response to drought stress.
The high-throughput transcriptome sequencing of M.
sinensis under drought stress has greatly enriched the current genomic available resources.
The comparison of DEGs under different periods of drought stress identified a wealth of candidate genes involved in drought tolerance regulatory networks, which will facilitate further genetic improvement and molecular studies of the M.
sinensis.
نمط استشهاد جمعية علماء النفس الأمريكية (APA)
Nie, Gang& Huang, Linkai& Ma, Xiao& Ji, Zhongjie& Zhang, Yajie& Tang, Lu…[et al.]. 2017. Enriching Genomic Resources and Transcriptional Profile Analysis of Miscanthus sinensis under Drought Stress Based on RNA Sequencing. International Journal of Genomics،Vol. 2017, no. 2017, pp.1-12.
https://search.emarefa.net/detail/BIM-1167267
نمط استشهاد الجمعية الأمريكية للغات الحديثة (MLA)
Nie, Gang…[et al.]. Enriching Genomic Resources and Transcriptional Profile Analysis of Miscanthus sinensis under Drought Stress Based on RNA Sequencing. International Journal of Genomics No. 2017 (2017), pp.1-12.
https://search.emarefa.net/detail/BIM-1167267
نمط استشهاد الجمعية الطبية الأمريكية (AMA)
Nie, Gang& Huang, Linkai& Ma, Xiao& Ji, Zhongjie& Zhang, Yajie& Tang, Lu…[et al.]. Enriching Genomic Resources and Transcriptional Profile Analysis of Miscanthus sinensis under Drought Stress Based on RNA Sequencing. International Journal of Genomics. 2017. Vol. 2017, no. 2017, pp.1-12.
https://search.emarefa.net/detail/BIM-1167267
نوع البيانات
مقالات
لغة النص
الإنجليزية
الملاحظات
Includes bibliographical references
رقم السجل
BIM-1167267
قاعدة معامل التأثير والاستشهادات المرجعية العربي "ارسيف Arcif"
أضخم قاعدة بيانات عربية للاستشهادات المرجعية للمجلات العلمية المحكمة الصادرة في العالم العربي
تقوم هذه الخدمة بالتحقق من التشابه أو الانتحال في الأبحاث والمقالات العلمية والأطروحات الجامعية والكتب والأبحاث باللغة العربية، وتحديد درجة التشابه أو أصالة الأعمال البحثية وحماية ملكيتها الفكرية. تعرف اكثر