Comparative Transcriptome Analysis of Leaves and Roots in Response to Sudden Increase in Salinity in Brassica napus by RNA-seq
المؤلفون المشاركون
Chow, Kingsley
Kwan, Bih-Hua
Kok, Eng-Piew
Yong, Hui-Yee
Kitashiba, Hiroyasu
Nanzyo, Masami
Nishio, Takeshi
Zou, Zhongwei
Nasu, Shiori
المصدر
العدد
المجلد 2014، العدد 2014 (31 ديسمبر/كانون الأول 2014)، ص ص. 1-19، 19ص.
الناشر
Hindawi Publishing Corporation
تاريخ النشر
2014-08-07
دولة النشر
مصر
عدد الصفحات
19
التخصصات الرئيسية
الملخص EN
Amphidiploid species in the Brassicaceae family, such as Brassica napus, are more tolerant to environmental stress than their diploid ancestors. A relatively salt tolerant B.
napus line, N119, identified in our previous study, was used.
N119 maintained lower Na+ content, and Na+/K+ and Na+/Ca2+ ratios in the leaves than a susceptible line.
The transcriptome profiles of both the leaves and the roots 1 h and 12 h after stress were investigated.
De novo assembly of individual transcriptome followed by sequence clustering yielded 161,537 nonredundant sequences.
A total of 14,719 transcripts were differentially expressed in either organs at either time points.
GO and KO enrichment analyses indicated that the same 49 GO terms and seven KO terms were, respectively, overrepresented in upregulated transcripts in both organs at 1 h after stress.
Certain overrepresented GO term of genes upregulated at 1 h after stress in the leaves became overrepresented in genes downregulated at 12 h.
A total of 582 transcription factors and 438 transporter genes were differentially regulated in both organs in response to salt shock.
The transcriptome depicting gene network in the leaves and the roots regulated by salt shock provides valuable information on salt resistance genes for future application to crop improvement.
نمط استشهاد جمعية علماء النفس الأمريكية (APA)
Yong, Hui-Yee& Zou, Zhongwei& Kok, Eng-Piew& Kwan, Bih-Hua& Chow, Kingsley& Nasu, Shiori…[et al.]. 2014. Comparative Transcriptome Analysis of Leaves and Roots in Response to Sudden Increase in Salinity in Brassica napus by RNA-seq. BioMed Research International،Vol. 2014, no. 2014, pp.1-19.
https://search.emarefa.net/detail/BIM-473816
نمط استشهاد الجمعية الأمريكية للغات الحديثة (MLA)
Yong, Hui-Yee…[et al.]. Comparative Transcriptome Analysis of Leaves and Roots in Response to Sudden Increase in Salinity in Brassica napus by RNA-seq. BioMed Research International No. 2014 (2014), pp.1-19.
https://search.emarefa.net/detail/BIM-473816
نمط استشهاد الجمعية الطبية الأمريكية (AMA)
Yong, Hui-Yee& Zou, Zhongwei& Kok, Eng-Piew& Kwan, Bih-Hua& Chow, Kingsley& Nasu, Shiori…[et al.]. Comparative Transcriptome Analysis of Leaves and Roots in Response to Sudden Increase in Salinity in Brassica napus by RNA-seq. BioMed Research International. 2014. Vol. 2014, no. 2014, pp.1-19.
https://search.emarefa.net/detail/BIM-473816
نوع البيانات
مقالات
لغة النص
الإنجليزية
الملاحظات
Includes bibliographical references
رقم السجل
BIM-473816
قاعدة معامل التأثير والاستشهادات المرجعية العربي "ارسيف Arcif"
أضخم قاعدة بيانات عربية للاستشهادات المرجعية للمجلات العلمية المحكمة الصادرة في العالم العربي
تقوم هذه الخدمة بالتحقق من التشابه أو الانتحال في الأبحاث والمقالات العلمية والأطروحات الجامعية والكتب والأبحاث باللغة العربية، وتحديد درجة التشابه أو أصالة الأعمال البحثية وحماية ملكيتها الفكرية. تعرف اكثر